DiatOmicBase
HomeGene PageGenome BrowserResourcesTranscriptomicsHelp
Select the bioproject you want to analyze by checking the box (like those). Samples corresponding to this bioproject will be placed in the Biosample box at the bottom of the page.
Drag and drop the samples you want to compare from the biosample box to the subset1 and subset2 boxes. Submit and your results will appear in a short time.

Select the experiment:

Select
BioProject Accession
Description
Nb runs
Nb replicates
SRA Experiments
Publication
PRJNA278661
Response to phosphate fluctuations
10
2
Time (4d / 8d) * (Pi depleted / CT) + Pi resupply 4d
PRJNA279965
Response to nitrogen starvation in a nitrate reductase knock-down line
12
3
(WT/KD-NR21) * (N replete (880 µM nitrate) / N starved (0 µM nitrate))
PRJEB11970
Comparison of cells grown in replete conditions collected at 4, 8, 20, and 36h with nitrate starved cells collected at 4, 8, and 20h, dark treatment for 8h, nocodazole treatment for 20h, and phosphate starvation for 36h
30
3
Treatment (CT (4h/8h/20h/36h), darkness (8h), no nitrate (4h/8h/20h), no phosphate (36h), nocodazole (20h))
PRJNA311568
Response to shift in nitrogen sources and availability in Wild Type and Nitrate reductase KO lines
74
2
40 = 2 strains (WT/NR-KO14) x Time (T0/T1/T3/T18/T18(II)/T36/T60/T84/T132/d10) 4 = 2 strains (WT/NR-KO14) x Treatment (NH4/N-free) 30 = treatment (NH4/N-free/NO3/NO2) x Time (NA/T-15/T-45/T-end)
PRJNA319251
Effect of competition with Alteromonas macleodii
18
3
Time (Exponential / Stationary) * competition (monoculture / co-culture + Alteromonas WT / co-culture + Alteromonas ΔnasA mutant)
PRJNA322663
Comparison of different CO2 and light conditions
36
3
CO2 (50/400/5000 ppm) * (0µE / 125µE) *(oligoDT / not)
PRJNA349063
Response to additions of Glufosinate-ammonium (GSA), L-Methionine sulfoximine (MSX), and Rapamycin (Rapa)
16
4
CT/GSA/MSX/Rapa
PRJNA360572
Response to grazing stress, imitated by injection of Acartia tonsa culture medium
6
3
grazing stress / CT
PRJNA376114
Transcriptomes of alternative oxidase (AOX) knock-down lines
12
2
(WT/ KD:AOX-C5 / KD:AOX-C9) * (early / late growth)
PRJNA377534
Comparison of wild type and CryP knock-down lines (Na1 and Ta3) under prolonged darkness (72h) and one hour after onset of blue light
15
2 or 3
(WT/ KD-Na1 / KD-Ta3) * (Dark / BL)
PRJNA382762
Comparison of Nitrate Reductase KO and Wild-Type Cells for a 10-d Time Course
60
3
[N-free + NH4 replete + NO3(1h/18h/42h/66h/90h/114h/138h/162h/228h)] x 2 strains (WT/KO)
PRJNA484278
Comparison of ambient and high pCO2
6
3
CO2 (400 / 1000 ppmv)
PRJNA551018
Comparison of low light and high light acclimated wild-type
6
3
LL (20 umol photons/m2/s) / HL (940 umol photons/m2/s)
Unpublished, submitted by Agarwal, 25-Jun-2019
PRJEB26173
Comparison of 3 morphotypes
12
4
fusiform (at 100% seawater salinity) / oval (at 10% seawater salinity) / triradiate (at 100% seawater salinity)
PRJEB34512
Comparison of ambient and high pCO2
6
3
CO2 (400 / 1000 ppmv)
Unpublished, submitted by Marine Life College, Ocean University of China, 9-Nov-2019
PRJNA595993
Response to trans,trans-2,4-decadienal (DD) during the light cycle
8
2
Treatment (DMSO / DD) * Time (3h / 6h)
PRJNA610772
Comparison of different exposition to Naphthenic Acids
9
3
CT / 4mg NAs / 16mg NAs
PRJNA625589
Comparison of early and stationary growth phase
6
3
early (4d) / stationary (14d) growth phase
PRJNA666211
Response to red and blue light of PtAureo1a knockout lines
30
3-4
Strain (WT / KO-Aureo1 str K8 / KO-Aureo1 str K9) * Treatment (BL/RL) * Time (0 / 10 / 60 min after light shift)
PRJNA649600
Comparison of chitin synthase transgenic cell lines with WT and empty vector transformant
9
3
WT / Transgenic chitin synthase / Empty vector cell lines
Unpublished, submitted by Zhanru Shao, CAS, 29-Jul-2020
PRJNA714085
Comparison of contemporary and elevated CO2 over the diel cycle
16
4
pH (7.6 / 7.9) * Diurnal Cycle (Light / Dark)
PRJNA600551
Response to phloroglucinol
6
3
CT / Phloroglucinol
PRJNA542375
Response to iron limitation over the diel cycle in two CO2 conditions
24
3
Iron (1000 / 50 nmol L-1) * CO2 (400 / 800 ppm) * Diurnal cycle (Light / Dark)
PRJNA524702
Response to inhibitory conditions (chemicals)
16
3
CT / Fen 24h / Fen 48h / Flu 72h / Ro 24h
PRJNA417734
Response to silicon starvation and subsequent silicon re-addition
27
3
re-addition of silicon after (0.5 / 1 / 2 / 3 / 4 / 5 / 6 hr) + Si starvation during 24 hr + CT
Page
of 2
Loading...

Choose the subsets to compare:

Biosample

Subset 1

Subset 2

Contact us
Legal Notice