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Gene:

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Genome Browser

Click on "TRACKS SELECTOR" (top left) to display additional information on the browser: Phatr2 prediction, ecotype variants, histone marks, ncRNAs...

GO terms

GO terms are retrieved from Uniprot API.

Domains

Domains are retrieved from Uniprot API.

KEGG

KEGG annotations were retrieved from g:Profiler or was done using 3 differents tools: BlastKOALA, GhostKOALA, KofamKOALA in Ait-Mohamed et al., 2020.

KOG

Kog annotations were retrieved from Uniprot API.

Comparative Genomics

PLAZA 4.0: an integrative resource for functional, evolutionary and comparative plant genomics Nucleic Acids Res.
Van Bel M. et al., 2017

pico-PLAZA, a genome database of microbial photosynthetic eukaryotes. Environmental Microbiology 15(8):2147-53
Vandepoele, K. et al., 2013
Comparative genomics data for this gene are hosted on the Diatoms PLAZA instance here.

PLAZA is an access point for comparative and functional genomics centralizing genomic data produced by different genome sequencing initiatives. It integrates sequence data and comparative genomics methods and provides an online platform to perform evolutionary analyses and data mining.



Comments


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